Difference between revisions of "File:Fig2 Tsai JofPersMed2016 6-1.png"

Latest revision as of 21:45, 21 November 2016

Description	Figure 2. Bioinformatics Workflow. Our process is divided into four major phases. During this process, there are three trigger points that require manual hands-on time: (1) Alignment and Variant Calling; (2) Annotation and Upload to Oracle SQL; and (3) Variant Filtration. Segmenting these processes offer the ability to check the data integrity throughout this process and the flexibility of utilizing parts of these scripts for processing a non-standard clinical or research sample.
Source	Tsai, E.A.; Shakbatyan, R.; Evan, J.; Rossetti, P.; Graham, C.; Sharma, H.; Lin, C.-F., Lebo, M.S. (2016). "Bioinformatics workflow for clinical whole genome sequencing at Partners HealthCare Personalized Medicine". Journal of Personalized Medicine 6 (1): 12. doi:10.3390/jpm6010012. PMC PMC4810391. PMID 26927186. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=PMC4810391.
Date	2016
Author	Tsai, E.A.; Shakbatyan, R.; Evan, J.; Rossetti, P.; Graham, C.; Sharma, H.; Lin, C.-F., Lebo, M.S.
Permission (Reusing this file)	Creative Commons Attribution 4.0 International
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+==Summary==
+{{Information
+|Description='''Figure 2.''' Bioinformatics Workflow. Our process is divided into four major phases. During this process, there are three trigger points that require manual hands-on time: (1) Alignment and Variant Calling; (2) Annotation and Upload to Oracle SQL; and (3) Variant Filtration. Segmenting these processes offer the ability to check the data integrity throughout this process and the flexibility of utilizing parts of these scripts for processing a non-standard clinical or research sample.
+|Source={{cite journal |journal=Journal of Personalized Medicine |title=Bioinformatics workflow for clinical whole genome sequencing at Partners HealthCare Personalized Medicine |author=Tsai, E.A.; Shakbatyan, R.; Evan, J.; Rossetti, P.; Graham, C.; Sharma, H.; Lin, C.-F., Lebo, M.S. |volume=6 |issue=1 |pages=12 |year=2016 |doi=10.3390/jpm6010012 |pmid=26927186 |pmc=PMC4810391}}
+|Author=Tsai, E.A.; Shakbatyan, R.; Evan, J.; Rossetti, P.; Graham, C.; Sharma, H.; Lin, C.-F., Lebo, M.S.
+|Date=2016
+|Permission=[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International]
+}}
 == Licensing ==
 {{cc-by-4.0}}