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<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig0.5 Alperin JofCheminformatics2016 8.gif|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Huang iScience2022 25-8.jpg|240px]]</div>
'''"[[Journal:Terminology spectrum analysis of natural-language chemical documents: Term-like phrases retrieval routine|Terminology spectrum analysis of natural-language chemical documents: Term-like phrases retrieval routine]]"'''
'''"[[Journal:Elegancy: Digitizing the wisdom from laboratories to the cloud with free no-code platform|Elegancy: Digitizing the wisdom from laboratories to the cloud with free no-code platform]]"'''


This study seeks to develop, test and assess a methodology for automatic extraction of a complete set of ‘term-like phrases’ and to create a terminology spectrum from a collection of natural language PDF documents in the field of chemistry. The definition of ‘term-like phrases’ is one or more consecutive words and/or alphanumeric string combinations with unchanged spelling which convey specific scientific meanings. A terminology spectrum for a natural language document is an indexed list of tagged entities including: recognized general scientific concepts, terms linked to existing thesauri, names of chemical substances/reactions and term-like phrases. The retrieval routine is based on n-gram textual analysis with a sequential execution of various ‘accept and reject’ rules with taking into account the morphological and structural [[information]].
One of the top priorities in any [[laboratory]] is [[Archival informatics|archiving]] experimental data in the most secure, efficient, and errorless way. It is especially important to those in chemical and biological research, for it is more likely to damage experiment records. In addition, the transmission of experiment results from paper to electronic devices is time-consuming and redundant. Therefore, we introduce an [[Open-source software|open-source]] no-code [[electronic laboratory notebook]] (ELN), Elegancy, a [[Cloud computing|cloud-based]]/standalone web service distributed as a Docker image. Elegancy fits all laboratories but is specially equipped with several features benefitting biochemical laboratories. It can be accessed via various web browsers, allowing researchers to upload photos or audio recordings directly from their mobile devices. Elegancy also contains a meeting arrangement module, audit/revision control, and laboratory supply management system. We believe Elegancy could help the scientific research community gather evidence, share information, reorganize knowledge, and digitize laboratory works with greater ease and security ... ('''[[Journal:Elegancy: Digitizing the wisdom from laboratories to the cloud with free no-code platform|Full article...]]''')<br />
 
The assessment of the retrieval process, expressed quantitatively with a precision (P), recall (R) and F1-measure, which are calculated manually from a limited set of documents (the full set of text abstracts belonging to five EuropaCat events were processed) by professional chemical scientists, has proved the effectiveness of the developed approach. ('''[[Journal:Terminology spectrum analysis of natural-language chemical documents: Term-like phrases retrieval routine|Full article...]]''')<br />
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Latest revision as of 17:08, 10 April 2023

Fig1 Huang iScience2022 25-8.jpg

"Elegancy: Digitizing the wisdom from laboratories to the cloud with free no-code platform"

One of the top priorities in any laboratory is archiving experimental data in the most secure, efficient, and errorless way. It is especially important to those in chemical and biological research, for it is more likely to damage experiment records. In addition, the transmission of experiment results from paper to electronic devices is time-consuming and redundant. Therefore, we introduce an open-source no-code electronic laboratory notebook (ELN), Elegancy, a cloud-based/standalone web service distributed as a Docker image. Elegancy fits all laboratories but is specially equipped with several features benefitting biochemical laboratories. It can be accessed via various web browsers, allowing researchers to upload photos or audio recordings directly from their mobile devices. Elegancy also contains a meeting arrangement module, audit/revision control, and laboratory supply management system. We believe Elegancy could help the scientific research community gather evidence, share information, reorganize knowledge, and digitize laboratory works with greater ease and security ... (Full article...)

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